These are files (mostly Jupyter Notebooks) I have worked on during my rotation in the Koo Lab at Cold Spring Harbor Laboratory.
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rotation-koo-lab
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List of commits on branch main.Unverified
310bdf589c59f4ef9ef8511a479e69925c4bbcf3add dataset creation and model training
kkaczmarj committed 4 years ago
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772f370db336f0f3ab910c1cd38cb8f5333e093fadd `get_splits` function
kkaczmarj committed 4 years ago
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ab52396d7775ce651abdb6d05998e152bc44029fuse variable `this_meme_entry` in loop
kkaczmarj committed 4 years ago
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818d9727524d27a71bc52037df8e04a875155481add datasets + processing workflow
kkaczmarj committed 4 years ago
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5acf8f8dcfffdc2239a9889bf5851af71d4213f3default size for sampling is min of a and b
kkaczmarj committed 4 years ago
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4a3997794debbd07144f72429b33373aebc84636fix another typo in docstring of `bed_to_fasta_to_one_hot`
kkaczmarj committed 4 years ago