k
kdm9
Postdoctoral Fellow in Plant-pathogen Evolutionary Genomics. Consultant in Bioinformatics. Formerly at ANU, Canberra
319 repositories
163 followers
Tübingen, DE
Repositories
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kWIP
De novo estimates of genetic relatedness from next-gen sequencing data
C++
45
3
0
Updated 7 months ago
public
axe
Rapid competitive read demulitplexer. Made with tries.
C
23
5
2
Updated 6 months ago
public
SRApy
SRA python tools
Python
10
6
1
Updated 2 years ago
public
hail
Hail: extract lines from a file, a la `head -n x | tail -n y`
C
9
1
0
Updated 24 days ago
public
seqhax
Small sequence analysis tools that don't deserve their own repos.
C
8
0
0
Updated 9 months ago
public
Acanthophis
A comprehensive, opinionated plant metagenomics and variant calling pipeline in Snakemake
TeX
8
2
1
Updated 4 months ago
public
clogged
Tiny, configurable, pretty C logging library
C
6
0
0
Updated 3 years ago
public
2020_snakemake-workshop
Shell
4
1
0
Updated 9 months ago
public
NVTK
Tools for managing natural variation collections
Python
4
1
0
Updated a month ago
public
bioscripts
A Collection of Bioinformatic Scripts
Python
3
1
0
Updated 8 years ago
public
blindschleiche
31 bioinformatics utilities in a trenchcoat
Python
2
0
0
Updated 2 months ago
public
snakemake_executor_plugin_mpcdf
snakemake_executor_plugin_mpcdf
Python
2
0
1
Updated 3 months ago